Publications: 2009

  • Agrama HA, Yan W, Lee F, Fjellstrom R, Chen M-H, Jia M, McClung A (2009) Genetic assessment of a mini-core subset developed from the USDA Rice Genebank. Crop Sci 49:1336-1346
    http://crop.scijournals.org/cgi/content/abstract/cropsci;49/4/1336
  • Anderson TM, vonHoldt BM, Candille SI, Musiani M, Greco C, Stahler DR, Smith DW, Padhukasahasram B, Randi E, Leonard JA, Bustamante CD, Ostrander EA, Tang H, Wayne RK, Barsh GS (2009) Molecular and evolutionary history of melanism in North American gray wolves. Science 323:1339-1343
    http://www.sciencemag.org/cgi/content/abstract/323/5919/1339
  • Auton A, Bryc K, Boyko AR, Lohmueller KE, Novembre J, Reynolds A, Indap A, Wright MH, Degenhardt JD, Gutenkunst RN, King KS, Nelson MR, Bustamante CD (2009) Global distribution of genomic diversity underscores rich complex history of continental human populations. Genome Research 19:795-803
    http://genome.cshlp.org/content/19/5/795.abstract
  • Fitzgerald MA, McCouch SR, Hall RD (2009) Not just a grain of rice: the quest for quality. Trends Plant Sci 14:133-139
    http://www.sciencedirect.com/science/article/B6TD1-4VMWXRP-2/2/469c227d8d61c1d7156e49c43a8254f3
  • Gore M, Wright M, Ersoz E, Bouffard P, Szekeres ES, Jarvie TP, Hurwitz BL, Narechania A, Harkins T, Grills GS, Ware DH, Buckler ES (2009) Large-scale discovery of gene-enriched SNPs. Plant Genome 2:121-133
    http://plantgenome.scijournals.org/content/2/2/121.abstract
  • Jia Y, Lee FN, McClung A (2009) Determination of resistance spectra of the Pi-ta and Pi-k genes to U.S. races of Magnaporthe oryzae causing rice blast in a recombinant inbred line population. Plant Disease 93:639-644 Plant Disease 6:639-644
    http://dx.doi.org/10.1094/PDIS-93-6-0639
  • Kovach M, Calingacion MN, Fitzgerald M, McCouch S (2009) The origin and evolution of fragrance in rice (Oryza sativa L.). Proc Natl Acad Sci 106:14444-14449
    http://www.pnas.org/content/106/34/14444.full
  • Liu, G., Jia, Y., Correa-Victoria, F.J., Prado, G.A., Yeater, K.M., McClung, A.M., Correll, J.C. 2009. Mapping quantitative trait loci responsible for resistance to rice sheath blight disease using greenhouse assays. Phytopathology. 99(9):1078-1084.
    http://dx.doi.org/10.1094/PHYTO-99-9-1078
  • Maas L, McClung A, McCouch S (2009) Dissection of a QTL reveals an adaptive, interacting gene complex associated with transgressive variation for flowering time in rice. Theor Appl Genet DOI: 10.1007/s00122-009-1219-7
    http://dx.doi.org/10.1007/s00122-009-1219-7
  • McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, Bustamante CD, Weigel D, Mackill DJ, Bruskiewich RM, Rätsch G, Buell CR, Leung H, Leach JE (2009) Genome wide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences 106:12273-12278
    http://www.pnas.org/content/106/30/12273.abstract
  • Takano-Kai N, Jiang H, Kubo T, Sweeney M, Matsumoto T, Kanamori H, Padhukasahasram B, Bustamante C, Yoshimura A, Doi K, McCouch S (2009) Evolutionary history of GS3, a gene conferring grain length in rice. Genetics 182:1323-1334
    http://www.genetics.org/cgi/content/abstract/182/4/1323
  • Xu Y, This D, Pausch R, Vonhof W, Coburn J, Comstock J, McCouch S (2009) Leaf-level water use efficiency determined by carbon isotope discrimination in rice seedlings: genetic variation associated with population structure and QTL mapping. Theor Appl Genet 118:1065-1081
    http://dx.doi.org/10.1007/s00122-009-0963-z